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Caractérisation génomique des bactériophages isolés en Côte d’Ivoire.


par Aboubacar SYLLA
Université Felix HOUPHOUET- BOIGNY - Master 2 biotechnologies-biosécurité 2017
  

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ABSTRACT

Bacteriophages or phages are the viruses of bacteria and have the ability to lyse them. This lytic action makes phages a therapeutic alternative called phagotherapy against antibiotic therapy. The misuse of antibiotic therapy is now causing a worldwide resurgence of bacterial resistance to available anti-infectives. In Côte d'Ivoire, multiresistant bacteria are reported in clinical and environmental studies. The unknown phagotherapy of the professional medical profession and populations. Recent studies have reported the presence of phages with therapeutic potential, but no application is reported. The development of phage therapy requires complete morphological and genomic characterization of phages with lytic potential. The objective of determining the genomic profile of isolated bacteriophages in Ivory Coast. Specifically, to analyze their genome by the technique of pulsed field electrophoresis and enzymatic digestion. 5 phages including 2 lagoon phages of the Ebrié Lagoon (p A5a, Ebrios) and 3 phages (M3, p M7, p M11) isolated from the micromammals were included in this study. XbaI, XhoI and XmnI enzymes have been used for digestion of genomes. The results obtained show that the phages are double-stranded DNA phages. Pulsed field analysis shows that phages p A5a, p M3, p M7, p M11 have a genome size greater than 164 Kpb. The genomic diversity of phages is demonstrated by the restriction profiles of pulsed field electrophoresis and enzymatic digestion. This study shows that pulsed field gel electrophoresis (PFGE) is a more sensitive method than enzymatic digestion for genomic characterization. On the other hand, the enzymatic digestion of the phages is simple and fast and to determine the type of phage genetic material.

Keywords: Bacteriophage, Genetic diversity, PFGE, Enzymatic digestion, Ivory Coast.

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